At the time if i had removed the 3 intro movies it would have made the mod incompatible with any major mod.
However as FLMM 1.2 will allow mods that alter the same .ini files to coexist i should probably upload a new version.
Anyway to remove the intro movies you must find the following lines in 'freealncer.ini' located in your .../Freelancer/EXE/ directory :
{Startup}
movie_file = movies\MGS_Logo_Final.wmv
movie_file = movies\DA_Logo_Final.wmv
movie_file = movies\FL_Intro.wmv
(i have replaced square brackets ( [ ) with curley brackets ( { ) as the forums do not correctly display square brackets)
Delete all the 'movie_file' lines and the intro movies will be removed. Some versions of BiniQDU do not correctly save Freelancer.ini so you might have to save it as text, edit then save as Freelancer.ini to get it to work.